Link



Useful Research Tools

〇 Embryology education and research website

〇Bio-Atlas at the Jake Gittlen Laboratories for Cancer Research

     # Zebrafish Atlas

     # Human Atlas

〇 3D Atlas of Human Embryology

〇Genomicus - a genome-wide perspective to multispecies comparative genomics

〇GGGenome - ultrafast sequence search (e.g. for detection of CRISPR mismatch targets)

〇ZENBU - omics interactive visualization system (Mouse, Human)

     #Zebrafish TSS, H3K4me3, RNA seq data  (CAUTION! you shold choose "Zv9/danRer7" assembly of a reference zebrafish genome.)

       1, Open UCSC browser "Custom Tracks"

       2, Add "https://promshift.genereg.net/zebrafish/CAGE_and_nucleosome_tracks.txt" (Haberle et al, Nature (2014))

           Or "https://zeprome.genereg.net/downloads/danRer7/Zebrafish_tracks.txt" (Nepal et al, Genome Res (2013))

〇GTEx Portal - Portal for the Genotype-Tissue Expression (GTEx) project

〇WashU EpiGenome Browser

〇神戸学院大学 人体組織学・発生学カラースライド・データベース (Japanese Only)

〇東京大学・教養学部附属教養教育高度化機構自然科学教育高度化部門 学習支援教材

〇 医学用語辞典 WEB版(日本医学会)

〇 Allen Brain Map: ヒト・マウス脳アトラス 

〇3D Slicer: 無料3次元再構築ソフト


〇ApE: A plasmid Editor by M. Wayne Davis

〇CLC Sequence Viewer


〇 CRediT: Contributor Roles Taxonomy

〇 Enhancing scholarly sharing "How Can I Share It?"

〇 Poll Everywhere (アクティブラーニング用add -on)

 



Lab Web Sites in the Limb Development & Regeneration Community are also linked in "Google earth file (.kmz)". Please download it below! 

(2016.7.2 updated)

(2016.7.7 updated)

This file is opened by "Google earth App" or "Google earth for Desktop" www.google.com/earth/index.html    (iPhone/iPad) Download, Click, Open "kmz file", and tap shareicon (squere and arrow) with "Google earth App" (Desktop) Download "Google earth", and Open "kmz file" 

 ・Red pin: Fin/Limb Development and Evolution Lab 

 ・Blue pin: Fin/Limb Regeneration Lab 

When you click a pin, you can see "Lab Website" link and visit it easily. Bon voyage without PubMed! Request: tohruurhot@gmail.com

© 2013-2026 Tohru Yano. Tokyo, Japan
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